Projects

Multiple Instance Learning (MIL) ExamplesThis tutorial contains a baseline method of Multiple Instance Learning (MIL) classification from Whole Slide Images (WSI). The dataset is from Prostate cANcer graDe Assessment (PANDA)…

iSyntax ConverterPython tool that uses Philips' SDK to write slides in an intermediary raw format.Requirements* Python 3.6+ * Philips iSyntax SDK (https://www.openpathology.philips.com)The iSyntax SDK __must__ be downloaded separately from…

raw2ometiff converter =====================Java application to convert a directory of tiles to an OME-TIFF pyramid. This is the second half of iSyntax/.mrxs => OME-TIFF conversion.Requirements ============Java 8 or later is…

OpenSlideOpenSlide is a C library for reading whole slide image files (also known as virtual slides). It provides a consistent and simple API for reading files from multiple vendors.FeaturesOpenSlide can…

MONAI Label      MONAI Label is a server-client system that facilitates interactive medical image annotation by using AI.…

Official YOLOv7Sam added stuff to run: python detect.py --weights --classes 1 2 3 5 --source Implementation of paper - YOLOv7: Trainable bag-of-freebies sets new state-of-the-art for real-time object detectors ![Hugging…

OpenSlideOpenSlide is a C library for reading whole slide image files (also known as virtual slides). It provides a consistent and simple API for reading files from multiple vendors.FeaturesOpenSlide can…

Web Sam for UKHCWebSAM for UKHC is a three part package:WebSAM for UKHC RepositoryWebSAM for UKHC leverages Segment Anything to provide in-browser image segmentations. It consists of a ReactJS frontend,…

WSI to DICOM ConverterThis repository contains a tool that converts whole slide images (WSIs) to DICOM. To read the underlying whole slide images (WSIs), this tool relies on OpenSlide, which…

chatgptwrotethisA new Flutter project.Getting StartedThis app is the base of a flutter recording app designed to record audio, send it to a speech to text parser, and then do assorted…