Publications

Peer-reviewed papers, preprints, and conference publications.

63 items

Abstract Whole-slide images (WSIs) contain tissue information distributed across multiple magnification levels, yet most self-supervised methods treat these scales as independent views. This separation prevents models from learning representations that…

2025 arXiv preprint

Flanagan M, Dugger B, Gutman D, Pearce T, Cooper L, Kovacs G, Fardo D, Forest S, Kukull W, Crary J, Manthey D, Biber S, Vizcarra J, Gearing M, Sargurupremraj M,…

2024 Journal of Neuropathology...

Abstract Soft tissue tumors (STTs) pose diagnostic and therapeutic challenges due to their rarity, complexity, and morphological overlap. Accurate differentiation between benign and malignant STTs is important to set treatment…

2024 Journal of pathology...

Nash JB, Bumgardner C, Roggenkamp S, Friskney D, Armstrong S

2024 UCEA Annual Convention

Abstract BACKGROUND: Adherence to self-administered biologic therapies is important to induce remission and prevent adverse clinical outcomes in Inflammatory bowel disease (IBD). This study aimed to use administrative claims data…

2024 Crohn's & colitis...

Abstract OBJECTIVE: The objective of this study was to predict extubation readiness in preterm infants using machine learning analysis of bedside pulse oximeter and ventilator data. STUDY DESIGN: This is…

2024 The Journal of...

Abstract We present efforts in machine learning and time series forecasting to accurately predict counts of future suspected opioid overdoses recorded by Emergency Medical Services (EMS) in the state of…

2024 arXiv preprint

Abstract This paper introduces an approach that combines the language reasoning capabilities of large language models (LLMs) with the benefits of local training to tackle complex language tasks. The authors…

2024 AMIA Joint Summits...

AMIA Summits on Translational Science Proceedings (2024)

2024 AMIA Summits on...

Abstract INTRODUCTION/AIMS: Muscle ultrasound has high utility in clinical practice and research; however, the main challenges are the training and time required for manual analysis to achieve objective quantification of…

2024 medRxiv : the...